Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTGGGAGTGTTTGGCTCCAATGTCACCCAGCTTGAGGAGATCAGTGG
((((((((((((.((((((.((&.))))))))...)))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001102608
GeneSymbolCOL6A6
Binding site2511,2561
Score0.923
Seed1
Au0.5
Energy-27.5
Binding len26
Me-5.227
Phylopstem1.1670176846153846
Phylopflank1.3221623450000004
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure