Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTGGGAGAGGAGGGAATCGCTGGAGAAAGAGGAGCCCCTGGACCAGTGG
(((((((((((((((.(((((.&)))))..)))))))))..............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001102608
GeneSymbolCOL6A6
Binding site4499,4552
Score0.885
Seed1
Au0.426
Energy-27.3
Binding len53
Me-4.171
Phylopstem1.8963302444444448
Phylopflank2.0727917875
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end6
PositionCDS
2D Structure