Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCCCGAGGGCGGCGTGTGCCTACCTGGCAGCCCAGACGTGCTGGAGTCAGG
..((((((((..(((((((...&.)))))))......)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001102612
GeneSymbolPGPEP1L
Binding site541,596
Score0.923
Seed1
Au0.353
Energy-24.9
Binding len23
Me-11.129
Phylopstem1.548413375
Phylopflank1.3824491525
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure