Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTGAGGGAGGGGCCGGG
..(((((((((((((.(((...&))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001103150
GeneSymbolPNMA5
Binding site3088,3106
Score1.0
Seed1
Au0.338
Energy-27.3
Binding len18
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure