Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCAGCAGAGGGGCTGGTGG
(((((((((((((((.(((((.&))))))).))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001103160
GeneSymbolSH2D5
Binding site1036,1058
Score0.923
Seed1
Au0.338
Energy-28.7
Binding len22
Me-4.171
Phylopstem-0.11333818125000002
Phylopflank0.005956291250000037
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure