Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCTGGGAAGTTTTGTCTCCTCTGAGGTTGGCCCATGGCCAGTGA
((((((((.(((((((((((..&)))))))))))..........................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001104546
GeneSymbolRPP30
Binding site1036,1082
Score0.923
Seed1
Au0.441
Energy-23.8
Binding len46
Me-4.994
Phylopstem0.11902514545454546
Phylopflank0.11488460749999997
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end6
Position3UTR
2D Structure