Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTGCACCTGATGACCCAGAGGAGGGCCGGC
..(((((((.(((((((((...&.))))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001104631
GeneSymbolPDE4D
Binding site2252,2286
Score0.923
Seed1
Au0.426
Energy-26.7
Binding len19
Me-6.2
Phylopstem4.6994444444444445
Phylopflank2.9452078137499997
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure