Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCATTTTTACCACACAGTCCAGTTTGCATGTATAGCTAGGA
.((((((((((.(((((((((.&.))))))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001104925
GeneSymbolPCMTD2
Binding site2646,2690
Score0.923
Seed1
Au0.618
Energy-20.8
Binding len22
Me-7.14
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure