Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGGCCGCGGACACACGAGGGACGCGCCCGAGGAGCTGCAGGTGG
((((((((((((...((((...&.))))))))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001104925
GeneSymbolPCMTD2
Binding site36,81
Score0.885
Seed1
Au0.235
Energy-21.8
Binding len21
Me-6.819
Phylopstem0.6162255466666667
Phylopflank0.26226817665322577
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end4
Position5UTR
2D Structure