Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATAGATGCCAGT
..(((((((.(.(((((((...&))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001105077
GeneSymbolMECOM
Binding site170,187
Score0.846
Seed1
Au0.574
Energy-19.7
Binding len17
Me-9.546
Phylopstem3.8185047142857136
Phylopflank4.4330802525
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure