Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTTCAGACCCCTCTGACTCTCCAAACCTTCCCACACCAGGGAGCTGGTGG
((((((((((((..((((.((.&.)).))))....)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001105205
GeneSymbolRUSC1
Binding site1388,1441
Score0.846
Seed1
Au0.382
Energy-25.8
Binding len25
Me-6.084
Phylopstem-0.45230640000000005
Phylopflank1.0770687475
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure