Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGTCAGTTCAGAGCCAGG
..(((((((((..((((((((.&))))))))..))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346489
GeneSymbolTAOK3
Binding site1645,1669
Score0.846
Seed1
Au0.353
Energy-27.8
Binding len24
Me-9.593
Phylopstem5.392121774615385
Phylopflank5.1966888625
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure