Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAAGGAAAGGAGAGCCGTATTTTTAGTCATCCTAGGGCAGGAGCCACTGTGG
((((((((((((((((((..((&.))..))))))).))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001105518
GeneSymbolSWT1
Binding site3079,3133
Score1.0
Seed1
Au0.485
Energy-25.5
Binding len27
Me-3.938
Phylopstem0.33515861428571425
Phylopflank0.3134375300000001
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure