Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CGTGCCAGAAAAGCCAGTC
.(((((((..(((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001105522
GeneSymbolTRIM49D2
Binding site339,358
Score0.846
Seed1
Au0.485
Energy-20.5
Binding len16
Me-6.092
Phylopstem-1.2037875714285715
Phylopflank-0.6881039074999998
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure