Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAATTACCAACAGTGAAGCACTACAGGAGGCAACTGTGGCATTGCT
..((((((((((((((.....&.)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047417342
GeneSymbolZZZ3
Binding site2139,2188
Score1.0
Seed1
Au0.515
Energy-18.8
Binding len18
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure