Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGAGGTTAAGCCTCTAGGTGA
(((((((((((((((((((...&)))))))).)))...))))....)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047417374
GeneSymbolBDP1
Binding site3054,3082
Score0.923
Seed1
Au0.544
Energy-23.8
Binding len28
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure