Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGCGGGGACCATGGAGCCGGTGC
(((((((((((((((((((...&))).))))))....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001105556
GeneSymbolTHEMIS2
Binding site16,41
Score0.846
Seed1
Au0.294
Energy-26.8
Binding len25
Me-3.938
Phylopstem0.9958434004166666
Phylopflank0.6065423338333333
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure