Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCCATGGAGCTAGA
..((((((((..(((((((...&)))))))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001105563
GeneSymbolCCHCR1
Binding site730,750
Score0.846
Seed1
Au0.324
Energy-25.1
Binding len20
Me-11.129
Phylopstem1.6632305875
Phylopflank1.68497621875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure