Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCCATGGAGCTAGA
..((((((((..(((((((...&)))))))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001105564
GeneSymbolCCHCR1
Binding site838,858
Score0.846
Seed1
Au0.324
Energy-25.1
Binding len20
Me-11.129
Phylopstem1.692883375
Phylopflank1.3588078099999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure