Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTTCTCACTTGCCAGGG
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Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001105569
GeneSymbolMSGN1
Binding site10,29
Score0.846
Seed1
Au0.466
Energy-15.2
Binding len19
Me-15.378
Phylopstem1.4052230142857145
Phylopflank0.7762931986363637
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure