Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTGTGAGCACGGCGGGGCCAGCAGTGGGGGCAGCGAAGGCTGCAGTGTCGGTGGGGCCAGTGG
((((((((((...((((((((.&.))))....)))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001105569
GeneSymbolMSGN1
Binding site257,325
Score0.923
Seed1
Au0.397
Energy-24.8
Binding len25
Me-11.398
Phylopstem-0.08134775000000005
Phylopflank0.65574401
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure