Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGAGACGGAATCTTGCTCTATCTATTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001105574
GeneSymbolHMX3
Binding site1584,1633
Score0.923
Seed1
Au0.412
Energy-28.4
Binding len24
Me-10.109
Phylopstem-0.2563356981818182
Phylopflank-0.07788968800000001
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure