Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCAGAGACTTGGAGTCAGTC
.((((((((((((((.((((((&)))))))))))...))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001109662
GeneSymbolHECTD4
Binding site2200,2224
Score0.872
Seed1
Au0.529
Energy-26.0
Binding len24
Me-4.026
Phylopstem-0.26077185294117644
Phylopflank0.053452702500000004
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure