Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGAGGTGCCAGC
..(((((((....(((((....&)))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001109754
GeneSymbolPTPRB
Binding site6754,6770
Score0.846
Seed1
Au0.676
Energy-17.5
Binding len16
Me-13.66
Phylopstem3.1725124285714292
Phylopflank3.643928303000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure