Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCAGGGAGGGTATGCTGGGTG
(((((((((((..(.(.((...&))..).)..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001109977
GeneSymbolFHIP1A
Binding site4671,4692
Score0.821
Seed1
Au0.529
Energy-17.1
Binding len21
Me-9.309
Phylopstem-0.9579659090909091
Phylopflank0.28185453625000007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure