Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAGTGGAAGGATGACCAGC
..((((((((((((...((((.&))))...))))))).).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001110358
GeneSymbolRNASE9
Binding site1017,1039
Score0.846
Seed1
Au0.5
Energy-20.0
Binding len22
Me-5.925
Phylopstem-0.08883259785714283
Phylopflank-0.021049108625000028
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure