Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCAGTGGAAGGATGACCAGC
..((((((((((((...((((.&))))...))))))).).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001110359
GeneSymbolRNASE9
Binding site1127,1149
Score0.846
Seed1
Au0.5
Energy-20.0
Binding len22
Me-5.925
Phylopstem0.17316879285714284
Phylopflank-0.11372600712499997
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure