Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCACCCGGAGCGAGTCAGC
..(((((((..((((((((.((&)).)))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001111046
GeneSymbolCCNA1
Binding site193,213
Score0.846
Seed1
Au0.309
Energy-22.7
Binding len20
Me-9.024
Phylopstem0.098015625
Phylopflank-0.18153230925000008
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
Position5UTR
2D Structure