Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATAATATTTTGAGTGTGTCAGGG
.((((((((((...........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001111112
GeneSymbolUBE2K
Binding site1007,1032
Score0.846
Seed1
Au0.662
Energy-17.2
Binding len12
Me-10.255
Phylopstem1.9257396
Phylopflank2.9123297724999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure