Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGTCAGGG
.((((((((((...........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001111113
GeneSymbolUBE2K
Binding site997,1008
Score0.846
Seed1
Au0.662
Energy-17.4
Binding len11
Me-10.255
Phylopstem2.86117528
Phylopflank2.837786975
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure