Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGAAGGGTAGCCC
....(((((((((((((((((.&))))))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001111283
GeneSymbolIGF1
Binding site2723,2742
Score0.923
Seed0
Au0.544
Energy-27.9
Binding len19
Me-9.547
Phylopstem0.022842694444444454
Phylopflank0.89591286375
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure