Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACCATGTTGGCCAGGTT
(((((((..(((..(((((...&)))))..)))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001111284
GeneSymbolIGF1
Binding site5945,5965
Score1.0
Seed1
Au0.559
Energy-19.4
Binding len20
Me-9.454
Phylopstem0.36713379999999995
Phylopflank1.8877733375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure