Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGGAAAAGACTGGTTCTAACTCCAAAGCACAGG
..(((((((((((((((((...&))))))))))))......................)).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001112704
GeneSymbolVAX1
Binding site1520,1561
Score0.974
Seed1
Au0.441
Energy-23.0
Binding len41
Me-4.957
Phylopstem2.6619554074999994
Phylopflank4.357035162500001
Longest consecutive pairings12
Position of longest consecutive pairings29
Pairings in 3prime end5
Position3UTR
2D Structure