Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTCGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001112800
GeneSymbolSLC8A1
Binding site11106,11133
Score0.846
Seed1
Au0.338
Energy-27.3
Binding len22
Me-10.109
Phylopstem0.3573003636363636
Phylopflank0.18565609675000003
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure