Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001112801
GeneSymbolSLC8A1
Binding site11088,11109
Score0.846
Seed1
Au0.338
Energy-27.2
Binding len21
Me-10.109
Phylopstem0.08202356363636365
Phylopflank0.23984402087499998
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure