Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGAAAGATGACCCAGGAGGGGGAAGGGTGA
((((..(((((((((((((...&.)))))))))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047417451
GeneSymbolSEMA6A
Binding site18,51
Score0.846
Seed0
Au0.412
Energy-26.8
Binding len22
Me-9.958
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure