Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAAGGTAGCTGCAGC
((((((((((..((((.....&))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346494
GeneSymbolTAOK3
Binding site966,983
Score1.0
Seed1
Au0.544
Energy-19.7
Binding len17
Me-10.109
Phylopstem1.1812844999999998
Phylopflank2.98303605
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure