Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGGCTGTGCTGCGAA
(((((((.(((((((.((((.&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047417451
GeneSymbolSEMA6A
Binding site5307,5326
Score0.923
Seed1
Au0.426
Energy-20.6
Binding len19
Me-6.484
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure