Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTGCCATTGTCAGCCAGGA
.((((((..((((((..(((..&)))..))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001113490
GeneSymbolAMOT
Binding site1558,1578
Score0.846
Seed1
Au0.426
Energy-18.8
Binding len20
Me-7.396
Phylopstem0.4078028333333334
Phylopflank0.16696341637499992
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure