Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGCACTTTAGAAAGGGGACCCTGACTGTGTTAAAGAAGAAGTGG
((((((((((((((((((.(((&)))))))........)))))))).))...................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001113546
GeneSymbolLIMA1
Binding site302,352
Score0.846
Seed1
Au0.485
Energy-19.7
Binding len50
Me-3.938
Phylopstem0.7378645043478258
Phylopflank0.6353235225
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure