Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCAGCACTTTAGAAAGGGGACCCTGACTGTGTTAAAGAAGAAGTGG
((((((((((((((((((.(((&)))))))........)))))))).))...................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001113547
GeneSymbolLIMA1
Binding site186,236
Score0.923
Seed1
Au0.485
Energy-19.7
Binding len50
Me-3.938
Phylopstem1.1302057956521743
Phylopflank0.9314973799999999
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end7
Position5UTR
2D Structure