Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCAGTGCCAGGA
.((((((((....(((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001114086
GeneSymbolCLIC5
Binding site1947,1961
Score0.846
Seed1
Au0.441
Energy-16.6
Binding len14
Me-12.497
Phylopstem-0.2743286225
Phylopflank-0.13049095875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure