Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTTGGCCAGGC
.((((((..(((..........&)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001114121
GeneSymbolCHEK1
Binding site2536,2548
Score0.846
Seed1
Au0.559
Energy-15.6
Binding len12
Me-10.278
Phylopstem0.25252508333333334
Phylopflank-0.457060323
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure