Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGAGAGGAGGATCGCGTGA
(((((((((((((((.(((...&.))).)))))))))..))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001114122
GeneSymbolCHEK1
Binding site3202,3252
Score1.0
Seed1
Au0.456
Energy-21.4
Binding len24
Me-4.171
Phylopstem0.13664838333333332
Phylopflank0.14616645374999995
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure