Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTATATTTTTGCCCAGGTC
((((((((...(((((((((..&)))))))))..)))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001114139
GeneSymbolDMTN
Binding site2284,2305
Score0.846
Seed1
Au0.559
Energy-17.4
Binding len21
Me-9.061
Phylopstem2.793242222222222
Phylopflank0.90961434875
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure