Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGAAATTTTGTGCATTATTATTGTAGGGTTA
.(((((((((((((((((.((&))))))).....).))........))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001114387
GeneSymbolTMPRSS11A
Binding site2200,2234
Score0.846
Seed1
Au0.691
Energy-20.1
Binding len34
Me-3.793
Phylopstem2.2223284048387093
Phylopflank1.6836776063750005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure