Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGATCTCACACAAGTGGTCAGTT
.(((((((.((((((((((...&)))))))........))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001114395
GeneSymbolCNTLN
Binding site435,462
Score0.846
Seed1
Au0.588
Energy-20.2
Binding len27
Me-4.85
Phylopstem4.353071172222222
Phylopflank4.99793479
Longest consecutive pairings7
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure