Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTAAATAGCTGCTGCTGTGGG
(((((((.((((((((.....&.)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346500
GeneSymbolCD164
Binding site883,907
Score0.923
Seed1
Au0.647
Energy-19.0
Binding len18
Me-6.251
Phylopstem-0.04230822500000009
Phylopflank0.7017026787499999
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure