Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGATATTTGTTGCAC
.((((((.....(((((((((&)))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346500
GeneSymbolCD164
Binding site2856,2878
Score0.923
Seed1
Au0.676
Energy-18.5
Binding len22
Me-14.577
Phylopstem-0.5406610999999999
Phylopflank-0.6024393662500002
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure