Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTACAAAAGCCCTAGAGCATCGTGTAGCTGCGGT
((((((((((((((.((.(((&.))).)).)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047417700
GeneSymbolFASTKD3
Binding site1165,1201
Score0.846
Seed1
Au0.529
Energy-21.3
Binding len27
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure